List of GKV output

GKV output files are:

• The output directory DIR/

  • cnt/*cnt*

  • fxv/*fxv*

  • phi/\*phi\*, \*Al\*, \*mom\*, \*trn\*, (\*tri\* for nonlinear runs)

  • hst/\*bln\*, \*geq\*, \*gem\*, \*qes\*, \*qem\*, \*wes\*, \*wem\*, \*eng\*, \*men\*, \*dtc\*, \*mtr\*, (\*frq\*, \*dsp\* for linear runs)

  • log/*log*

Their explanations are summarized below.

Explanations on GKV output files

Table 2 cnt/gkvp.cnt.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	End of the run
MPI ranks	All
Total files	nprocw*nprocz*nprocv*nprocm*nprocs*(Total run numbers)
GKV unit	ocnt
Stored data	Coordinates: t Simulation time is particle species (integer) mu magnetic moment (or vp perpendicular velocity) vl parallel velocity zz field-aligned coordinate ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: cnt[t,is,mu,vl,zz,ky,kx] Perturbed distribution function \(\tilde{f}_{\mathrm{s}\mathbf{k}}\) (double complex).

Table 3 fxv/gkvp.fxv.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_fxv
MPI ranks	All
Total files	nprocw*nprocz*nprocv*nprocm*nprocs*(Total run numbers)
GKV unit	ofxv
Stored data	Coordinates: t Simulation time, is particle species (integer) mu magnetic moment (or vp perpendicular velocity) vl parallel velocity, zz field-aligned coordinate ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: fxv[t,is,mu,vl,zz,ky,kx] Perturbed distribution function \(\tilde{f}_{\mathrm{s}\mathbf{k}}\) (double complex) at iz = -nz in each rankz .

Table 4 phi/gkvp.phi.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_ptn
MPI ranks	ranks == 0 .and. vel_rank == 0
Total files	nprocw*nprocz*(Total run numbers)
GKV unit	ophi
Stored data	Coordinates: t Simulation time zz field-aligned coordinate ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: phi[t,zz,ky,kx] Perturbed electrostatic potential \(\tilde{\phi}_{\mathbf{k}}\) .

Table 5 phi/gkvp.Al.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_ptn
MPI ranks	ranks == 0 .and. vel_rank == 0
Total files	nprocw*nprocz*(Total run numbers)
GKV unit	oAl
Stored data	Coordinates: t Simulation time zz field-aligned coordinate ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: Al[t,zz,ky,kx] Perturbed vector potential \(\tilde{A}_{\parallel\mathbf{k}}\) .

Table 6 phi/gkvp.mom.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_ptn
MPI ranks	vel_rank == 0
Total files	nprocw*nprocz*nprocs*(Total run numbers)
GKV unit	omom
Stored data	Coordinates: t Simulation time is particle species (integer) imom index of fluid moments (integer) zz field-aligned coordinate ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: mom[t,is,imom,zz,ky,kx] Perturbed fluid moment (double complex). In the present version nmom = 6 : \(\tilde{n}_{\mathrm{s}\mathbf{k}} = \int dv^3\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) \(\tilde{u}_{\parallel\mathrm{s}\mathbf{k}} = \int dv^3\, v_\parallel\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) \(\tilde{p}_{\parallel\mathrm{s}\mathbf{k}} = \int dv^3\, \frac{m_\mathrm{s} v_\parallel^2}{2}\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) \(\tilde{p}_{\perp\mathrm{s}\mathbf{k}} = \int dv^3\, \mu B\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) \(\tilde{q}_{\parallel\parallel\mathrm{s}\mathbf{k}} = \int dv^3\, v_\parallel \frac{m_\mathrm{s} v_\parallel^2}{2}\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) \(\tilde{q}_{\parallel\perp\mathrm{s}\mathbf{k}} = \int dv^3\, v_\parallel \mu B\, J_{0\mathrm{s}\mathbf{k}}\, \tilde{f}_{\mathrm{s}\mathbf{k}}\) Normalized by \(\delta_\mathrm{ref}n_\mathrm{ref}\) , \(\delta_\mathrm{ref}n_\mathrm{ref}v_\mathrm{ref}\) , \(\delta_\mathrm{ref}n_\mathrm{ref}T_\mathrm{ref}\) , \(\delta_\mathrm{ref}n_\mathrm{ref}T_\mathrm{ref}\) , \(\delta_\mathrm{ref}n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) , \(\delta_\mathrm{ref}n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) , respectively.

Table 7 phi/gkvp.trn.(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_eng
MPI ranks	zsp_rank == 0 .and. vel_rank == 0
Total files	nprocw*nprocs*(Total run numbers)
GKV unit	otrn
Stored data	Coordinates: t Simulation time is particle species (integer) itrn index of entropy balance diagnostics (integer) ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: trn[t,is,itrn,ky,kx] \(S_{\mathrm{s}\mathbf{k}}(-nx:nx,0:ny)\) : Perturbed gyrocenter entropy \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref}]\) (real*8) \(W_{\mathrm{E}\mathbf{k}}(-nx:nx,0:ny)\) : Electrostatic field energy including polarization \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref}]\) (real*8) \(W_{\mathrm{M}\mathbf{k}}(-nx:nx,0:ny)\) : Magnetic field energy \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref}]\) (real*8) \(R_{\mathrm{sE}\mathbf{k}}(-nx:nx,0:ny)\) : Wave–particle interaction \(( W_{\mathrm{E}\mathbf{k}} \rightarrow S_{\mathrm{s}\mathbf{k}} )\) \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(R_{\mathrm{sM}\mathbf{k}}(-nx:nx,0:ny)\) : Wave–particle interaction \(( W_{\mathrm{M}\mathbf{k}} \rightarrow S_{\mathrm{s}\mathbf{k}} )\) \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(I_{\mathrm{sE}\mathbf{k}}(-nx:nx,0:ny)\) : Nonlinear entropy transfer by \(\mathbf{E}\times\mathbf{B}\) flow \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(I_{\mathrm{sM}\mathbf{k}}(-nx:nx,0:ny)\) : Nonlinear entropy transfer by magnetic flutter \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(D_{\mathrm{s}\mathbf{k}}(-nx:nx,0:ny)\) : Collisional dissipation \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(\Gamma_{\mathrm{sE}\mathbf{k}}(-nx:nx,0:ny)\) : Particle flux by \(\mathbf{E}\times\mathbf{B}\) flow \([\delta_\mathrm{ref}^2 n_\mathrm{ref} v_\mathrm{ref}]\) (real*8) \(\Gamma_{\mathrm{sM}\mathbf{k}}(-nx:nx,0:ny)\) : Particle flux by magnetic flutter \([\delta_\mathrm{ref}^2 n_\mathrm{ref} v_\mathrm{ref}]\) (real*8) \(Q_{\mathrm{sE}\mathbf{k}}(-nx:nx,0:ny)\) : Energy flux by \(\mathbf{E}\times\mathbf{B}\) flow \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}]\) (real*8) \(Q_{\mathrm{sM}\mathbf{k}}(-nx:nx,0:ny)\) : Energy flux by magnetic flutter \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}]\) (real*8) See also Supplemental Entropy balance equation for each wavenumber and plasma species .

Table 8 phi/gkvp.tri.mx(mxt in 4 digits)my(myt in 4 digits).(inum in 3 digits).zarr/

Field	Description
File type	Zarr format binary
Output timing	dtout_ptn (when calc_type == "nonlinear" and num_triad_diag > 0 )
MPI ranks	rank == 0
Total files	nprocs*num_triad_diag*(Total run numbers)
GKV unit	otri
Stored data	Coordinates: t Simulation time is particle species (integer) itri index of triad transfer diagnostics (integer) ky Field-line-label (poloidal) wavwenumber kx radial wavenumber Data variables: tri[t,is,itri,ky,kx] \(J_{\mathrm{sE}\mathbf{k}}^{\mathbf{p,q}}(-nx:nx,-global_{y}:global_{y})\) : Triad transfer function from modes \(\mathbf{p}, \mathbf{q}\) to mode \(\mathbf{k}\) via \(\mathbf{E}\times\mathbf{B}\) nonlinearity \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(J_{\mathrm{sE}\mathbf{p}}^{\mathbf{q,k}}(-nx:nx,-global_{y}:global_{y})\) : Cyclic change \((\mathbf{k,p,q}) \rightarrow (\mathbf{p,q,k})\) (real*8) \(J_{\mathrm{sE}\mathbf{q}}^{\mathbf{k,p}}(-nx:nx,-global_{y}:global_{y})\) : Cyclic change \((\mathbf{p,q,k}) \rightarrow (\mathbf{q,k,p})\) (real*8) \(J_{\mathrm{sM}\mathbf{k}}^{\mathbf{p,q}}(-nx:nx,-global_{y}:global_{y})\) : Triad transfer function from modes \(\mathbf{p}, \mathbf{q}\) to mode \(\mathbf{k}\) via magnetic-flutter nonlinearity \([\delta_\mathrm{ref}^2 n_\mathrm{ref} T_\mathrm{ref} v_\mathrm{ref}/L_\mathrm{ref}]\) (real*8) \(J_{\mathrm{sM}\mathbf{p}}^{\mathbf{q,k}}(-nx:nx,-global_{y}:global_{y})\) : Cyclic change \((\mathbf{k,p,q}) \rightarrow (\mathbf{p,q,k})\) (real*8) \(J_{\mathrm{sM}\mathbf{q}}^{\mathbf{k,p}}(-nx:nx,-global_{y}:global_{y})\) : Cyclic change \((\mathbf{p,q,k}) \rightarrow (\mathbf{q,k,p})\) (real*8) Diagnosed for a fixed mode \(\mathbf{k} = (\texttt{mxt,myt})\) and plotted as a 2D function of \(\mathbf{p} = (p_x,p_y)\) , where the triad condition determines \(\mathbf{q} = -\mathbf{k}-\mathbf{p}\) . See also Supplemental Triad transfer function .

Table 9 hst/gkvp_f0.48.bln.(ranks in 1 digits).(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rank == 0
Total files	nprocs*(Total run numbers)
GKV unit	obln
Stored data	time, \(S_{\mathrm{s}}\) , \(W_{\mathrm{E}}\) , \(W_{\mathrm{M}}\) , \(R_{\mathrm{sE}}\) , \(R_{\mathrm{sM}}\) , \(I_{\mathrm{sE}}\) , \(I_{\mathrm{sM}}\) , \(D_{\mathrm{s}}\) , \(\frac{T_\mathrm{s}\Gamma_{\mathrm{sE}}}{L_{p\mathrm{s}}}\) , \(\frac{T_\mathrm{s}\Gamma_{\mathrm{sM}}}{L_{p\mathrm{s}}}\) , \(\frac{\Theta_{\mathrm{sE}}}{L_{T\mathrm{s}}}\) , \(\frac{\Theta_{\mathrm{sM}}}{L_{T\mathrm{s}}}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real*8) \(S_{\mathrm{s}}\) (0:1): Perturbed gyrocenter entropy [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real*8). \(W_{\mathrm{E}}\) (0:1): Electrostatic field energy including polarization [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real*8). \(W_{\mathrm{M}}\) (0:1): Magnetic field energy [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real*8). \(R_{\mathrm{sE}}\) (0:1): Wave-particle interaction ( \(W_{\mathrm{E}\bm{k}} \rightarrow S_{\mathrm{s}\bm{k}}\) ) [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(R_{\mathrm{sM}}\) (0:1): Wave-particle interaction ( \(W_{\mathrm{M}\bm{k}} \rightarrow S_{\mathrm{s}\bm{k}}\) ) [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(I_{\mathrm{sE}}\) (0:1): Nonlinear entropy transfer by \(\bm{E}\times\bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(I_{\mathrm{sM}}\) (0:1): Nonlinear entropy transfer by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(D_{\mathrm{s}}\) (0:1): Collisional dissipation [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(\frac{T_\mathrm{s}\Gamma_{\mathrm{sE}}}{L_{p\mathrm{s}}}\) : Particle flux term by \(\bm{E}\times\bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(\frac{T_\mathrm{s}\Gamma_{\mathrm{sM}}}{L_{p\mathrm{s}}}\) : Particle flux term by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(\frac{\Theta_{\mathrm{sE}}}{L_{T\mathrm{s}}}\) : Heat flux term by \(\bm{E}\times\bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). \(\frac{\Theta_{\mathrm{sM}}}{L_{T\mathrm{s}}}\) : Heat flux term by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}/L_\mathrm{ref}\) ] (real*8). The 0th and 1st components of \(S_\mathrm{s}\) – \(D_\mathrm{s}\) correspond to non-zonal ( \(k_y \neq 0\) ) and zonal ( \(k_y = 0\) ) fluctuations, respectively.

Table 10 hst/gkvp_f0.48.ges.(ranks in 1 digits).(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rank == 0
Total files	nprocs*(Total run numbers)
GKV unit	oges
Stored data	time, \(\Gamma_{\mathrm{sE}}\) , \(\Gamma_{\mathrm{sE}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(\Gamma_{\mathrm{sE}}\) : Total particle flux by \(\bm{E} \times \bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}v_\mathrm{ref}\) ] (real). \(\Gamma_{\mathrm{sE}k_y}\) (0:global_ny): \(k_y\) spectrum of the particle flux by \(\bm{E} \times \bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}v_\mathrm{ref}\) ] (real).

Table 11 hst/gkvp.gem.(ranks in 1 digits).(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rank == 0
Total files	nprocs*(Total run numbers)
GKV unit	ogem
Stored data	time, \(\Gamma_{\mathrm{sM}}\) , \(\Gamma_{\mathrm{sM}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(\Gamma_{\mathrm{sM}}\) : Total particle flux by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}v_\mathrm{ref}\) ] (real). \(\Gamma_{\mathrm{sM}k_y}\) (0:global_ny): \(k_y\) spectrum of the particle flux by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}v_\mathrm{ref}\) ] (real).

Table 12 hst/gkvp.qes.(ranks in 1 digits).(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rank == 0
Total files	nprocs*(Total run numbers)
GKV unit	oqes
Stored data	time, \(Q_{\mathrm{sE}}\) , \(Q_{\mathrm{sE}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(Q_{\mathrm{sE}}\) : Total energy flux by \(\bm{E} \times \bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) ] (real). \(Q_{\mathrm{sE}k_y}\) (0:global_ny): \(k_y\) spectrum of the energy flux by \(\bm{E} \times \bm{B}\) flow [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) ] (real).

Table 13 hst/gkvp.qem.(ranks in 1 digits).(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rank == 0
Total files	nprocs*(Total run numbers)
GKV unit	oqem
Stored data	time, \(Q_{\mathrm{sM}}\) , \(Q_{\mathrm{sM}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(Q_{\mathrm{sM}}\) : Total energy flux by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) ] (real). \(Q_{\mathrm{sM}k_y}\) (0:global_ny): \(k_y\) spectrum of the energy flux by magnetic flutter [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}v_\mathrm{ref}\) ] (real).

Table 14 hst/gkvp.wes.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	owes
Stored data	time, \(W_{\mathrm{E}}\) , \(W_{\mathrm{E}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(W_{\mathrm{E}}\) : Total electrostatic field energy including polarization [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real). \(W_{\mathrm{E}k_y}\) (0:global_ny): \(k_y\) spectrum of the electrostatic field energy [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real).

Table 15 hst/gkvp.wem.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	owem
Stored data	time, \(W_{\mathrm{M}}\) , \(W_{\mathrm{M}k_y}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(W_{\mathrm{M}}\) : Total magnetic field energy [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real). \(W_{\mathrm{M}k_y}\) (0:global_ny): \(k_y\) spectrum of the magnetic field energy [ \(\delta_\mathrm{ref}^2n_\mathrm{ref}T_\mathrm{ref}\) ] (real).

Table 16 hst/gkvp.eng.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	oeng
Stored data	time, \(\sum_{k_x,k_y} \langle |\tilde{\phi}_{\bm{k}}|^2 \rangle\) , \(\sum_{k_x} \langle |\tilde{\phi}_{\bm{k}}|^2 \rangle\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(\sum_{k_x,k_y} \langle |\tilde{\phi}_{\bm{k}}|^2 \rangle\) : Squared amplitude of the perturbed electrostatic potential [ \((\delta_\mathrm{ref}T_\mathrm{ref}/e_\mathrm{ref})^2\) ] (real). \(\sum_{k_x} \langle |\tilde{\phi}_{\bm{k}}|^2 \rangle\) (0:global_ny): \(k_y\) spectrum of the squared amplitude of the perturbed electrostatic potential [ \((\delta_\mathrm{ref}T_\mathrm{ref}/e_\mathrm{ref})^2\) ] (real).

Table 17 hst/gkvp.men.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	omen
Stored data	time, \(\sum_{k_x,k_y} \langle |\tilde{A}_{\parallel\bm{k}}|^2 \rangle\) , \(\sum_{k_x} \langle |\tilde{A}_{\parallel\bm{k}}|^2 \rangle\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(\sum_{k_x,k_y} \langle |\tilde{A}_{\parallel\bm{k}}|^2 \rangle\) : Squared amplitude of the perturbed electrostatic potential [ \((\delta_\mathrm{ref}\rho_\mathrm{ref}B_\mathrm{ref})^2\) ] (real). \(\sum_{k_x} \langle |\tilde{A}_{\parallel\bm{k}}|^2 \rangle\) (0:global_ny): \(k_y\) spectrum of the squared amplitude of the perturbed electrostatic potential [ \((\delta_\mathrm{ref}\rho_\mathrm{ref}B_\mathrm{ref})^2\) ] (real).

Table 18 hst/gkvp.dtc.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_dtc
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	odtc
Stored data	time, dt, dt_limit, dt_nl where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) dt : Time step size [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) dt_limit : Estimation of time step size limit [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) dt_nl : Estimation of time step size limit from nonlinear advection [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real)

Table 19 hst/gkvp.mtr.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	Beginning of the run
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	omtr
Stored data	time, \(\theta\) (or \(\varphi\) ), \(B, \frac{\partial B}{\partial x}, \frac{\partial B}{\partial y}, \frac{\partial B}{\partial z}, g^{xx}, g^{xy}, g^{xz}, g^{yy}, g^{yz}, g^{zz}, \sqrt{g}\) where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) \(\theta\) : Poloidal angle (or Toroidal angle \(\varphi\) when equib_type = “vmec”) (real) \(B\) : Magnetic field strength [ \(B_\mathrm{ref}\) ] (real) \(\frac{\partial B}{\partial x}, \frac{\partial B}{\partial y}, \frac{\partial B}{\partial z}\) : Derivative of \(B\) [ \(B_\mathrm{ref}/L_\mathrm{ref}\) ] (real) \(g^{xx}, g^{xy}, g^{xz} [L_\mathrm{ref}^{-1}], g^{yy}, g^{yz} [L_\mathrm{ref}^{-1}], g^{zz} [L_\mathrm{ref}^{-2}]\) : Metric tensor (real) \(\sqrt{g}\) : Jacobian [ \(L_\mathrm{ref}\) ] (real)

Table 20 hst/gkvp.frq.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	dtout_eng (when calc_type == "linear" or "lin_freq" )
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	ofrq
Stored data	time, omega where, time : Simulation time \(t\) [ \(L_\mathrm{ref}/v_\mathrm{ref}\) ] (real) omega(1:global_ny) : \(k_y\) spectrum of complex linear frequency \(\omega\) = (real frequency, growthrate) [ \(v_\mathrm{ref}/L_\mathrm{ref}\) ] (real, real) Complex frequency for \(k_x = 0\) at each time is evaluated as \(\omega = \omega_\mathrm{r} + i \gamma = \frac{\ln \tilde{\phi}_{\bm{k}}(t+\Delta t) - \ln \tilde{\phi}_{\bm{k}}(t)}{-i \Delta t}\) by assuming \(\tilde{\phi}_{\bm{k}}(t) \propto e^{-i\omega t}\) .

Table 21 hst/gkvp.dsp.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	End of the run (when calc_type == "linear" or "lin_freq" )
MPI ranks	rankg == 0
Total files	(Total run numbers)
GKV unit	odsp
Stored data	ky, omega, diff, 1-ineq where, ky : Field-line-label (poloidal) wavenumber \(k_y\) [ \(\rho_\mathrm{ref}^{-1}\) ] (real) omega : Complex linear frequency \(\omega\) = (real frequency, growthrate) [ \(v_\mathrm{ref}/L_\mathrm{ref}\) ] (real, real) diff : Relative residual error \(\frac{\omega(t) - \omega(t-\Delta t)}{\omega(t)}\) (real, real) 1-ineq : Convergence check based on Schwartz inequality (real) At the end of run, estimated complex frequency for \(k_x = 0\) are dumped. If some modes are not yet converged, they are commented out.

Table 22 log/gkvp.(rankg in 6 digits).(ranks in 1 digit).log.(inum in 3 digits)

Field	Description
File type	Ascii
Output timing	As needed
MPI ranks	All
Total files	nprocw*nprocz*nprocv*nprocm*nprocs*(Total run numbers)
GKV unit	olog
Stored data	Simulation log